stlearn.pl.trajectory.DE_transition_plot¶
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stlearn.pl.trajectory.DE_transition_plot(adata: anndata._core.anndata.AnnData, top_genes: int = 10, font_size: int = 6, name: str = None, dpi: int = 150, output: str = None) → Optional[anndata._core.anndata.AnnData]¶ Differential expression between transition markers.
- Parameters
adata – Annotated data matrix.
top_genes – Number of genes using to plot.
font_size – Size of the font.
name – Name of the output figure file.
dpi – DPI of the output figure.
output – Save the figure as file or not.
- Returns
- Return type
Figure object