stlearn.tl.cci.merge¶

stlearn.tl.cci.merge(adata: anndata._core.anndata.AnnData, use_lr: str = 'cci_lr', use_het: str = 'cci_het', verbose: bool = True) → anndata._core.anndata.AnnData¶

Merge results from cell type heterogeneity and L-R clustering :param adata: :type adata: AnnData The data object including the cell types to count :param use_lr: :type use_lr: str CCI LR scores :param use_het: :type use_het: str CCI HET scores