stlearn.add.annotation

stlearn.add.annotation(adata: anndata._core.anndata.AnnData, label_list: list, use_label: str = 'louvain', copy: bool = False) → Optional[anndata._core.anndata.AnnData]

Adding annotation for cluster

Parameters

• adata – Annotated data matrix.

• label_list – List of the labels which assigned to current clustering result.

• use_label – Choosing clustering type.

• copy – Return a copy instead of writing to adata.

Returns

• Depending on copy, returns or updates adata with the following fields.

• **[clustering method name]_anno** (adata.obs field) – The annotation of cluster results.